[Users-list] Pasted verbatim, but still can't found the license.
Checked the filename too...
Wong Hua
wong at lptl.jussieu.fr
Tue May 30 18:00:29 CEST 2006
I am sorry to bother again...
I think I've made the proper modifications, which means I've cleaned up
PATH from all references to GRID_DIR, and now the aliases are given by
env_grid.sh...
Launching with Grid gives the expected hang up...
So I think I cleared that out...
In last message you wrote :
ps: In passing from the command line executables to the Greater GUI, on
first run, don't forget to check paths and directories are properly set
inside the Options dialog (accessible from the File menu).
So I went to the option dialog...
Here I've put :
GRID path ---> /users/invites/wong/mygrid/
grub.dat file ---> /users/invites/wong/mygrid/grub.dat
When importing PDB.pdb from the greater01 tutorial I have a GRIN error
I read the archive, and find nothing helpful because I set the proper
path in the options, I think.
I followed the tutorial, launching Greater from
/users/invites/wong/mygrid/tutorials/greater01
set the filtering to semi-automatic
entered PDB.pdb into the dialog box
Here is the GRINLOUT text.
Did I forget something (again) ?
###########GRINLOUT#########################
A file called:
PDB_in.lout
already exists. It has been renamed:
PDB_in.lout.4
A file called:
PDB_in.kout
already exists. It has been renamed:
PDB_in.kout.4
PROGRAM GRIN - (VERSION 22)
***************************
***************************
DIRECTIVES
==========
CODE VALUE
IDIR 5
INAT 10
/users/invites/wong/mygrid/grub.dat
INKO 11
PDB_in.pdb
LOUT 6
PDB_in.lout
KOUT 20
PDB_in.kout
ALHY 0.0400
IHVA 0
LEVL 2
MOVE 1
IHAC 0
NEHY 1
QQHY 0.0000
VDHY 0.6300
*******************************************************************************
MESSAGES AND WARNINGS CONCERNING INPUT FROM THE BROOKHAVEN DATA BANK:-
--------------------------------------------------------------------
HEADER FIRST
TEST
TER
END
(N1030-I) TOTAL CHARGE ON ALL ATOMS, HETATMS AND HYDROGENS
WHICH ARE A PART OF THE TARGET = 8.001
SET DIRECTIVE LEVL=3 AND REPEAT THIS RUN IF YOU WANT
MORE INFORMATION ABOUT THE CHARGE DISTRIBUTION.
*** THANK YOU FOR USING PROGRAM GRIN ***
....BUT PLEASE CHECK THE OUTPUT
Please set Directive LEVL = 3 and rerun GRIN again if you
need more detailed information about possible errors.
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